Alexandros Stamatakis

Alexandros Stamatakis, zoologist

The Exelixis Lab, Scientific Computing Group, Heidelberg Institute for Theoretical Studies, Heidelberg, Germany.
Karlsruhe Institute of Technology, Institute for Theoretical Informatics, Karlsruhe, Germany.

Publications

(List may be incomplete)

2009

Hejnol, A., Obst, M., Stamatakis, A., Ott, M., Rouse, G.W., Edgecombe, G.D., Martinez, P., Baguñà, J., Bailly, X., Jondelius, U., Wiens, M., Müller W.E.G., Seaver, E., Wheer, W.C., Martindale, M.Q., Giribet, G. & Dunn, C.W. 2009. Assessing the root of bilaterian animals with scalable phylogenomic methods. Proceedings of the Royal Society (B) 276(1677): 4261–4270. DOI: 10.1098/rspb.2009.0896 . Reference page.

2014

Misof, B., Liu, S., Meusemann, K., Peters, R.S., Donath, A., Mayer, C., Frandsen, P.B., Ware, J., Flouri, T., Beutel, R.G., Niehuis, O., Petersen, M., Izquierdo-Carrasco, F., Wappler, T., Rust, J., Aberer, A.J., Aspöck, U., Aspöck, H., Bartel, D., Blanke, A., Berger, S., Böhm, A., Buckley, T.R., Calcott, B., Chen, J., Friedrich, F., Fukui, M., Fujita, M., Greve, C., Grobe, P., Gu, S., Huang, Y., Jermiin, L.S., Kawahara, A.Y., Krogmann, L., Kubiak, M., Lanfear, R., Letsch, H., Li, Y., Li, Z.-Y., Li, J., Lu, H., Machida, R., Mashimo, Y., Kapli, P., McKenna, D.D., Meng, G., Nakagaki, Y., Navarrete-Heredia, J.L., Ott, M., Ou, Y., Pass, G., Podsiadlowski, L., Pohl, H., Reumont, B.M. von, Schütte, K., Sekiya, K., Shimizu, S., Slipinski, A., Stamatakis, A., Song, W., Su, X., Szucsich, N.U., Tan, M., Tan, X., Tang, M., Tang, J., Timelthaler, G., Tomizuka, S., Trautwein, M., Tong, X., Uchifune, T., Walzl, M.G., Wiegmann, B.M., Wilbrandt, J., Wipfler, B., Wong, T.K.F., Wu, Q., Wu, G., Xie, Y., Yang, S., Yang, Q., Yeates, D.K., Yoshizawa, K., Zhang, Q., Zhang, R., Zhang, W., Zhang, Y., Zhao, J., Zhou, C., Zhou, L., Ziesmann, T., Zou, S., Li, Y., Xu, X., Zhang, Y., Yang, H.-M., Wang, J., Wang, J., Kjer, K.M. & Zhou, X. 2014. Phylogenomics resolves the timing and pattern of insect evolution. Science 346(6210): 763–767. DOI: 10.1126/science.1257570 . Reference page.
Jarvis, E.D., Mirarab, S, Aberer, A.J., Li, B., Houde, P., Li, C., Ho, S.Y.W., Faircloth, B.C., Nabholz, B., Howard, J.T., Suh, A., Weber, C.C., da Fonseca, R.R., Li, J.-W., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., Ganapathy, G., Boussau, B., Bayzid, S., Zavidovych, V., Subramanian, S., Gabaldón, T., Capella-Gutiérrez, S., Huerta-Cepas, J., Rekepalli, B., Munch, K., Schierup, M., Lindow, B., Warren, W.C., Ray, D., Green, R.E., Bruford, M.W., Zhan, X.-J., Dixon, A., Li, S.-B., Li, N., Huang, Y.-H., Derryberry, E.P., Bertelsen, M.F., Sheldon, F.H., Brumfield, R.T., Mello, C.V., Lovell, P.V., Wirthlin, M., Schneider, M.P.C., Prosdocimi, F., Samaniego, J.A., Vargas Velazquez, A.M., Alfaro-Núñez, A., Campos, P.F., Petersen, B., Sicheritz-Ponten, T., Pas, A., Bailey, T., Scofield, P., Bunce, M., Lambert, D.M., Zhou, Q., Perelman, P., Driskell, A.C., Shapiro, B., Xiong, Z.-J., Zeng, Y.-L., Liu, S.-P., Li, Z.-Y., Liu, B.-H., Wu, K., Xiao, J., Yinqi, X., Zheng, Q., Zhang, Y., Yang, H.-M., Wang, J., Smeds, L., Rheindt, F.E., Braun, M., Fjeldså, J., Orlando, L., Barker, F.K., Jønsson, K.A., Johnson, W., Koepfli, K.-P., O’Brien, S.J., Haussler, D., Ryder, O.A., Rahbek, C., Willerslev, E., Graves, G.R., Glenn, T.C., McCormack, J., Burt, D., Ellegren, H., Alström, P., Edwards, S.V., Stamatakis, A., Mindell, D.P., Cracraft, J., Braun, E.L., Warnow, T., Jun, W., Gilbert, M.T.P. & Zhang, G.-J. 2014. Whole-genome analyses resolve early branches in the tree of life of modern birds. Science 346 (6215): 1320–1331. DOI: 10.1126/science.1253451 ResearchGate. Supplementary materials: PDF Reference page.

2018

Psonis, N., Antoniou, A., Karameta, E., Leaché, A.D., Kotsakiozi, P., Darriba, D., Kozlov, A., Stamatakis, A., Poursanidis, D., Kukushkin, O. Jablonski, D., Crnobrnja-Isailović, J., Gherghel, I., Lymberakis, P. & Poulakakis, N. 2018. Resolving complex phylogeographic patterns in the Balkan Peninsula using closely related wall-lizard species as a model system. Molecular Phylogenetics and Evolution 125: 100–115. DOI: 10.1016/j.ympev.2018.03.021 Reference page.

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